Primary Health Care Institute has three academic departments which include; Department of Allied Health Sciences and Nursing, Department of Public Health and Department of Health Systems Management. Training programs that are conducted at the institute are under the mentioned departments. They include; ordinary diploma in Clinical medicine, Certificate in Nursing which are under the department of allied health sciences and nursing, ordinary diploma in health promotion and certificate in community health under the department of public health and ordinary diploma in district health management under the department of health systems management. Each department is led by head of department and training programs are led by training program coordinators.

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